CE Data Preparation

You are helping users prepare their data for use with calibrated-explanations.

Required references

• development/adrs/ADR-002-validation-and-exception-design.md
• development/adrs/ADR-009-input-preprocessing-and-mapping-policy.md
• src/calibrated_explanations/core/validation.py
• src/calibrated_explanations/preprocessing/builtin_encoder.py

Use this skill when

• A user's data has mixed types, NaN values, or categorical features.
• CE raises input validation errors.
• Configuring automatic encoding (auto_encode='auto').
• Understanding how CE handles feature preprocessing.
• Exporting or importing preprocessing mappings.

Common scenarios

1. Categorical features

CE requires numeric input by default. For categorical features:

explainer = WrapCalibratedExplainer(model, auto_encode='auto')
explainer.fit(X_train, y_train)  # auto-encoding activates here

• auto_encode='auto': CE's built-in encoder handles categorical columns deterministically.
• Custom preprocessor: Pass your own sklearn transformer via the preprocessor parameter.

2. Mixed types (DataFrame input)

When passing a DataFrame with mixed dtypes:

• Numeric columns pass through unchanged.
• Non-numeric columns require auto_encode='auto' or a custom preprocessor.
• Without preprocessing, CE raises a ValidationError with actionable guidance listing the offending columns.

3. Missing values (NaN)

CE does not impute missing values by default:

• Preprocess NaN values before passing to CE.
• The built-in encoder does not handle NaN; use a custom preprocessor with imputation if needed.

4. Unseen categories at inference

Per ADR-009, the unseen_category_policy controls behavior:

• "error" (default): Raises ValidationError on unseen categories.
• "ignore": Maps unseen categories to a sentinel output with a warning.

5. Mapping export/import

After fitting, you can export and import preprocessing mappings:

mapping = explainer.export_mapping()  # JSON-safe dict
# ... save to file or transfer ...
explainer.import_mapping(mapping)     # restore on another instance

Validation error diagnostics

When CE raises input errors, check:

1. Column types: Are all columns numeric? If not, enable auto_encode.
2. Shape: Does X have the same number of features as training data?
3. NaN/Inf: Are there missing or infinite values?
4. Unseen categories: Are there categories in test data not seen during fit?

Constraints

• Always fit and calibrate before explaining (CE-first invariant).
• The built-in encoder is deterministic given the same stable_seed.
• Mapping export produces JSON-safe primitives only; no opaque blobs.
• Preprocessing does not change calibration semantics.